BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021C01SP1|AL427728
(950 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig998 1746 0.0
>3x_Contig998
Length = 4885
Score = 1746 bits (874), Expect = 0.0
Identities = 932/951 (98%), Gaps = 5/951 (0%)
Strand = Plus / Minus
Query: 2 atacgtgtttggaccatgttgccctctttcatctcttctagcaacagctttgcataggat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1857 atacgtgtttggaccatgttgccctctttcatctcttctagcaacagctttgcttaggat 1798
Query: 62 tttatgcacctttgaattggtggatgttggtacaaacatcattgatttcgtaatttcacc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1797 tttatgcacctttgaattggtggatgttggtacaaacatcattgatttcgtaatttcacc 1738
Query: 122 accctccacacattgaattagttcttgctcctcatgtgataccgtcaaatatgtgttttc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1737 accctccacacattgaattagttcttgctcctcatgtgataccgtcaaatatgtgttttc 1678
Query: 182 agtattatttacmagaatatcagtatattcatcacccactttcaaagaaaatgttccatc 241
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1677 agtattatttacaagaatatcagtatattcatcacccactttcaaagaaaatgttccatc 1618
Query: 242 agaccattcgacaatttgggcatttgattctttgamaacmcgttcgtctttatcacgaga 301
|||||||||||||||||||||||||| |||||||| ||| ||| ||||||| ||||||||
Sbjct: 1617 agaccattcgacaatttgggcatttg-ttctttgaaaacacgtccgtcttt-tcacgaga 1560
Query: 302 atatctccacctaatagtgttttcctcgatcaatctatctcctaactgatcttctttcga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1559 atatctccacctaatagtgttttcctcgatcaatctatctcctaactgatcttctttcga 1500
Query: 362 tgaatactttgacacacggtcctccactttcttttggaaacttggtggatcavatggrac 421
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 1499 tgaatactttgacacacggtcctccactttcttttggaaacttggtggatcaaatggaac 1440
Query: 422 tgggtctatcgtcaaanactgtggtaccttggcataatatatcgtcttatcatctgcycc 481
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1439 tgggtctatcgtcaaaaactgtggtaccttggcataatatatcgtcttatcatctgcacc 1380
Query: 482 gttagcrgtcttgtaagggaccacatgtttgacaatttccacgtccacctccttgtactt 541
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1379 gttagcagtcttgtaagggaccacatgtttgacaatttccacgtccacctccttgtactt 1320
Query: 542 cttctcgtattcttcctccgattgtccttcataatcttcccctagaratttacgattatg 601
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1319 cttctcgtattcttcctccgattgtccttcataatcttcccctagaaatttacgattata 1260
Query: 602 catcgcttgttcctcatcctcttcatcatctatcactctatgatgggatgtaccggcaga 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 catcgcttgttcctcatcctcttcatcatctatcactctatgatgggatgtaccggcaga 1200
Query: 662 tgaatcatctgagtcattttgttgttcatctaggctctgttgttggttttcttcctcact 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 tgaatcatctgagtcattttgttgttcatctaggctctgttgttggttttcttcctcact 1140
Query: 722 ttcatcaccaaatagatcatctagtgcatcactgaccttctcttcaatctgttcattatt 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 ttcatcaccaaatagatcatctagtgcatcactgaccttctcttcaatctgttcattatt 1080
Query: 782 caccctttctggttcttcttctactctatctgacataatggtctacaaakttgaactgag 841
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1079 caccctttctggttcttcttctactctatctgacataatggtctacaaagttgaactgag 1020
Query: 842 ctagcacaaggattgawtagaaattcttcttggttttcaaataaaggc-aactttacaa- 899
|||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1019 ctagcacaaggattgaatagaaattcttcttggttttcaaataaaggcaaactttacaac 960
Query: 900 caggaagaatcttgtttctttagcatgtcttatttctcg-ttacattaatc 949
||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 959 caggaagaatcttgtttctttagcatgtcttatttctcgtttacattaatc 909
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7716
Number of Sequences: 1807
Number of extensions: 7716
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 950
length of database: 10,358,551
effective HSP length: 16
effective length of query: 934
effective length of database: 10,329,639
effective search space: 9647882826
effective search space used: 9647882826
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)